Introduction
to
PDB:
What is PDB?
1. The PDB is the Protein Data Bank, a single worlwide repository for 3D structural data of biological molecules.
2.A PDB is a file, typically with a "pdb" file extension, contains 3D structural data of a particular biological molecule. In short, a PDB file is broken into two sections: (i) a header that contains much background information on the molecule in question such as authors and experimental conditions, (ii) 3D coordinate data that contain the vital experimental data in the form of 3D cartesian coordinates, B-factors, atom information, and more.
Subtilisn
Authors : Alomg. O, Gonzalez, A., Godin, N., De Leeuw, M., Mekel, M.J., Klein, D., Braun, S., Shoham, G., Walter, R.L.
Journal: (2008) Proteins -1082
Method: X-RAY DIFFRACTION
| Scientific Name: | Bacillus sphaericus |
Lex A repressor
Authors: Siponen, M.I.,Lehtio, L., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Karlberg, T., Kotenyova, T., Moche, M., Nilsson, M.E., Nordlund, P., Nyman, T., Persson, C., Sagemark, J., Thorsell, A.G., Tresaugues, L., Van-Den-Berg, S., Weigelt, J., Welin, M., Wikstrom, M., Wisniewska, M., Shueler, H.
Molecule Name : THIOEXTERASE,ADIPOSE ASSOCIATED, ISOFORM BFIT2
Number of Chain : 6
Number of Groups:472
Number of Atoms:3813
Number of Bonds:3967
| Scientific Name: Homo Sapiens Common Name: Human Method: X-RAY DIFFRACTION
|
Propyl Aminopeptidase
Authors: Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.
Journal: (1999) Biochemistry 38: 14810-14819
Method: X-RAY DIFFRACTION
Classification: | Hydrolase |
Structure Weight: | 29520.83 |
Scientific Name: Escherichia coli
Expression System: Escherichia coli
Molecule:
| METHIONINE AMINOPEPTIDASE |
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